Computational Biology: Unix/Linux, data processing and programming : with 19 figures and 12 tables

Capa
Springer Science & Business Media, 2004 - 284 páginas
1 Crítica
This book is a practical introduction to Unix/Linux and programming for biologists as well as for chemists and physicists who work in bioinformatics and biophysics. The goal is to learn about the power of the stream editor 'sed' and the programming languages 'awk' and 'perl' in order to extract or format information from various sources. It is written for beginners with no computational knowledge. Basic programming constructs are introduced and applied. With this book, the reader will be able to work in the Unix environment (BSD, Linux, Knoppix, MacOSX, CygWin) and to write programs in order to format and analyse large data files.
 

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Direitos de autor

Outras edições - Ver tudo

Computational Biology: Unix/Linux, Data Processing and Programming
Röbbe Wünschiers
Pré-visualização limitada - 2012
Computational Biology: Unix/Linux, Data Processing and Programming
Röbbe Wünschiers
Pré-visualização indisponível - 2012

Palavras e frases frequentes

amino acids archive array element assigned ATOM awk f awk script bash shell bin/bash bioperl called chmod ClustalW codon command line parameters compressed create crontab database default delete DNA sequence dollar character double quotes echo editing commands egrep eIsif codon Enzyme enzyme.txt executed exit status field separator filename foreach format Freddy function GeneList.txt genes genomes.txt getline grep hash home directory Hydrogenase input file Knoppix Levenshtein distance lines containing Linux login logout loop Mac OS X manpages match meta characters newline character operating system option password pattern space perl print command printf protein redirect regular expression screen script file search pattern Sect Section shell script shown in Terminal sort space character structure.pdb subroutine substitution syntax take a look text file umst Unix Unix/Linux variable Windows

Passagens conhecidas

Página 50 - Password: 230 Guest login ok, access restrictions apply. Remote system type is UNIX. Using binary mode to transfer files. ftp> ftp> cd /isc/bind/src/cur/bind-S 250 CWD command successful.
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Página 52 - Guest login ok, access restrictions apply. Remote system type is UNIX. Using binary mode to transfer files. ftp> cd /pub/perl/CPAN/modules/by-module 250 CWD command successful.
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Página 9 - I'd like to know what features most people would want. Any suggestions are welcome, but I won't promise I'll implement then :-) Linus (torvaldsCkruuna.helsinki.fi) PS.
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Página 7 - ... System, and recording and checking telephone service orders. Our own installation is used mainly for research in operating systems, languages, computer networks, and other topics in computer science, and also for document preparation. Perhaps the most important achievement of UNIX is to demonstrate that a powerful operating system for interactive use need not be expensive either in equipment or in human effort: UNIX can run on hardware costing as little as 840,000, and less than two manyears...
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Página 9 - Hello everybody out there using minix I'm doing a (free) operating system (just a hobby, won't be big and professional like gnu) for 386(486) AT clones. This has been brewing since april, and is starting to get ready. I'd like any feedback on things people like/dislike in minix, as my OS resembles it somewhat (same physical layout of the file-system (due to practical reasons) among other things) . I've currently ported bash(l.OS) and gcc(1.40), and things seem to work.
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Página 9 - Helsinki . FI > Date: 25 Aug 91 20:57:08 GMT Organization: University of Helsinki Hello everybody out there using minix I'm doing a (free) operating system (just a hobby, won't be big and professional like gnu) for 386(486) AT clones. This has been...
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Página 52 - Password: ********* 230 Guest login ok, access restrictions apply. Remote system type is UNIX. Using binary mode to transfer files. ftp> ftp> bye 221-You have transferred 0 bytes in 0 files.
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Página 1 - Pathologically Eclectic Rubbish Lister'. He describes Perl as: '...an interpreted language optimized for scanning arbitrary text files, extracting information from those text files, and printing reports based on that information. It's also a good language for many system management tasks. The language is intended to be practical (easy to use, efficient, complete) rather than beautiful (tiny, elegant, minimal). It combines...
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Página 86 - Each of these patterns may be either an asterisk (meaning all legal values) or a list of elements separated by commas. An element is either a number or two numbers separated by a minus sign (meaning an inclusive range). Note that the specification of days may be made by two fields (day of the month and day of the week). If both are specified as a list of elements, both are adhered to.
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Informação bibliográfica

QR code for Computational Biology
TítuloComputational Biology: Unix/Linux, data processing and programming : with 19 figures and 12 tables
AutoresRöbbe Wünschiers, Wünschiers Röbbe
Ediçãoilustrada
EditoraSpringer Science & Business Media, 2004
ISBN354021142X, 9783540211426
Número de páginas284 páginas
  
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